IL_4V4G_058
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- CUCG*CCGG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4G_058 not in the Motif Atlas
- Geometric match to IL_4UYK_005
- Geometric discrepancy: 0.3669
- The information below is about IL_4UYK_005
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.15
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 34
Unit IDs
4V4G|1|BA|C|81
4V4G|1|BA|U|82
4V4G|1|BA|C|83
4V4G|1|BA|G|84
*
4V4G|1|BA|C|97
4V4G|1|BA|C|98
4V4G|1|BA|G|99
4V4G|1|BA|G|100
Current chains
- Chain BA
- 5S RIBOSOMAL RNA
Nearby chains
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
- Chain BN
- 50S ribosomal protein L16
- Chain BW
- general stress protein Ctc
- Chain BZ
- 50S ribosomal protein L30
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