IL_4V4G_081
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- AUCAGC*GCUAU
- Length
- 11 nucleotides
- Bulged bases
- 4V4G|1|BB|C|1006
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4G_081 not in the Motif Atlas
- Geometric match to IL_8P9A_349
- Geometric discrepancy: 0.3873
- The information below is about IL_8P9A_349
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_71154.1
- Basepair signature
- cWW-cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 10
Unit IDs
4V4G|1|BB|A|1004
4V4G|1|BB|U|1005
4V4G|1|BB|C|1006
4V4G|1|BB|A|1007
4V4G|1|BB|G|1008
4V4G|1|BB|C|1009
*
4V4G|1|BB|G|1168
4V4G|1|BB|C|1169
4V4G|1|BB|U|1170
4V4G|1|BB|A|1171
4V4G|1|BB|U|1172
Current chains
- Chain BB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain BK
- 50S ribosomal protein L13
- Chain BR
- 50S ribosomal protein L20
- Chain BS
- 50S ribosomal protein L21
- Chain BZ
- 50S ribosomal protein L30
Coloring options: