3D structure

PDB id
8P9A (explore in PDB, NAKB, or RNA 3D Hub)
Description
80S yeast ribosome in complex with Methyllissoclimide
Experimental method
X-RAY DIFFRACTION
Resolution
2.9 Å

Loop

Sequence
CACAC*GCGUG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_49751.4
Basepair signature
cWW-cWW-cWW-cWW-cWW
Number of instances in this motif group
16

Unit IDs

8P9A|1|AR|C|3162
8P9A|1|AR|A|3163
8P9A|1|AR|C|3164
8P9A|1|AR|A|3165
8P9A|1|AR|C|3166
*
8P9A|1|AR|G|3284
8P9A|1|AR|C|3285
8P9A|1|AR|G|3286
8P9A|1|AR|U|3287
8P9A|1|AR|G|3288

Current chains

Chain AR
25S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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