IL_4V4G_206
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- AUCAG*CUAU
- Length
- 9 nucleotides
- Bulged bases
- 4V4G|1|DB|C|1006
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4G_206 not in the Motif Atlas
- Geometric match to IL_7VYX_002
- Geometric discrepancy: 0.3874
- The information below is about IL_7VYX_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4V4G|1|DB|A|1004
4V4G|1|DB|U|1005
4V4G|1|DB|C|1006
4V4G|1|DB|A|1007
4V4G|1|DB|G|1008
*
4V4G|1|DB|C|1169
4V4G|1|DB|U|1170
4V4G|1|DB|A|1171
4V4G|1|DB|U|1172
Current chains
- Chain DB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain DK
- 50S ribosomal protein L13
- Chain DR
- 50S ribosomal protein L20
- Chain DS
- 50S ribosomal protein L21
- Chain DZ
- 50S ribosomal protein L30
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