IL_4V4G_331
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- AUCA*UAU
- Length
- 7 nucleotides
- Bulged bases
- 4V4G|1|FB|C|1006
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4G_331 not in the Motif Atlas
- Geometric match to IL_3C3Z_002
- Geometric discrepancy: 0.3956
- The information below is about IL_3C3Z_002
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 12
Unit IDs
4V4G|1|FB|A|1004
4V4G|1|FB|U|1005
4V4G|1|FB|C|1006
4V4G|1|FB|A|1007
*
4V4G|1|FB|U|1170
4V4G|1|FB|A|1171
4V4G|1|FB|U|1172
Current chains
- Chain FB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain FK
- 50S ribosomal protein L13
- Chain FR
- 50S ribosomal protein L20
- Chain FS
- 50S ribosomal protein L21
- Chain FZ
- 50S ribosomal protein L30
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