IL_4V4G_741

3D structure

PDB id

4V4G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.

Experimental method

X-RAY DIFFRACTION

Resolution

11.5 Å

Loop

Sequence

GAG*CUCC

Length

7 nucleotides

Bulged bases

4V4G|1|FB|U|447

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4G_741 not in the Motif Atlas

Geometric match to IL_7ELQ_002

Geometric discrepancy: 0.3687

The information below is about IL_7ELQ_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_07785.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

4V4G|1|FB|G|42
4V4G|1|FB|A|43
4V4G|1|FB|G|44
*
4V4G|1|FB|C|446
4V4G|1|FB|U|447
4V4G|1|FB|C|448
4V4G|1|FB|C|449

Current chains

Chain FB

23S RIBOSOMAL RNA

Nearby chains