IL_4V4G_777
3D structure
- PDB id
- 4V4G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of five 70s ribosomes from Escherichia Coli in complex with protein Y.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 11.5 Å
Loop
- Sequence
- GG*UCAGC
- Length
- 7 nucleotides
- Bulged bases
- 4V4G|1|GA|C|1200, 4V4G|1|GA|A|1201
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4G_777 not in the Motif Atlas
- Homologous match to IL_4LFB_045
- Geometric discrepancy: 0.488
- The information below is about IL_4LFB_045
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_95583.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
4V4G|1|GA|G|1057
4V4G|1|GA|G|1058
*
4V4G|1|GA|U|1199
4V4G|1|GA|C|1200
4V4G|1|GA|A|1201
4V4G|1|GA|G|1202
4V4G|1|GA|C|1203
Current chains
- Chain GA
- 16S ribosomal RNA
Nearby chains
- Chain GC
- 30S ribosomal protein S3
- Chain GJ
- 30S ribosomal protein S10
- Chain GN
- 30S ribosomal protein S14
- Chain Ga
- protein Y
Coloring options: