IL_4V4I_010
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- UGAGUAG*CGAAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4I_010 not in the Motif Atlas
- Homologous match to IL_7RQB_007
- Geometric discrepancy: 0.1623
- The information below is about IL_7RQB_007
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_76042.2
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
4V4I|1|w|U|239
4V4I|1|w|G|240
4V4I|1|w|A|241
4V4I|1|w|G|242
4V4I|1|w|U|243
4V4I|1|w|A|244
4V4I|1|w|G|245
*
4V4I|1|w|C|253
4V4I|1|w|G|254
4V4I|1|w|A|255
4V4I|1|w|A|256
4V4I|1|w|A|257
4V4I|1|w|G|258
Current chains
- Chain w
- 23S LARGE SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain J
- 50S ribosomal protein L15
- Chain a
- 50S ribosomal protein L35
Coloring options: