IL_4V4I_134
3D structure
- PDB id
- 4V4I (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- CGGCCAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4I_134 not in the Motif Atlas
- Homologous match to IL_5J7L_024
- Geometric discrepancy: 0.3067
- The information below is about IL_5J7L_024
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_41203.4
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 11
Unit IDs
4V4I|1|y|C|504
4V4I|1|y|G|505
4V4I|1|y|G|506
4V4I|1|y|C|507
4V4I|1|y|C|508
4V4I|1|y|A|509
4V4I|1|y|A|510
4V4I|1|y|C|511
*
4V4I|1|y|G|540
4V4I|1|y|G|541
Current chains
- Chain y
- 16S SMALL SUBUNIT RIBOSOMAL RNA
Nearby chains
- Chain e
- 30S ribosomal protein S4
- Chain f
- 30S ribosomal protein S5
- Chain m
- 30S ribosomal protein S12
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