IL_4V4I_167

3D structure

PDB id

4V4I (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

G(4OC)C(5MC)G*CG(UR3)AAC

Length

11 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Modified nucleotides: 4OC, 5MC, UR3

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4I|1|y|G|1401
4V4I|1|y|4OC|1402
4V4I|1|y|C|1403
4V4I|1|y|5MC|1404
4V4I|1|y|G|1405
*
4V4I|1|y|C|1496
4V4I|1|y|G|1497
4V4I|1|y|UR3|1498
4V4I|1|y|A|1499
4V4I|1|y|A|1500
4V4I|1|y|C|1501

Current chains

Chain y

16S SMALL SUBUNIT RIBOSOMAL RNA

Nearby chains

Chain 1

MRNA

Chain w

Large subunit ribosomal RNA; LSU rRNA

Chain z

Transfer RNA; tRNA