IL_4V4P_032

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

GGUUG*CAUCC

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|AA|G|1058
4V4P|1|AA|G|1059
4V4P|1|AA|U|1060
4V4P|1|AA|U|1061
4V4P|1|AA|G|1062
*
4V4P|1|AA|C|1076
4V4P|1|AA|A|1077
4V4P|1|AA|U|1078
4V4P|1|AA|C|1079
4V4P|1|AA|C|1080

Current chains

Chain AA

23S ribosomal RNA

Nearby chains

Chain AI

50S ribosomal protein L7/L12

Chain AJ

50S ribosomal protein L7/L12

Chain AL

50S ribosomal protein L11

Chain AP

50S ribosomal protein L16

Chain AV

50S general stress protein CTC (L25)