IL_4V4P_040

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

UGCGAUGGG*CCUCUAAGCACAA

Length

22 nucleotides

Bulged bases

4V4P|1|AA|C|1585, 4V4P|1|AA|A|1586

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|AA|U|1415
4V4P|1|AA|G|1416
4V4P|1|AA|C|1417
4V4P|1|AA|G|1418
4V4P|1|AA|A|1419
4V4P|1|AA|U|1420
4V4P|1|AA|G|1421
4V4P|1|AA|G|1422
4V4P|1|AA|G|1423
*
4V4P|1|AA|C|1574
4V4P|1|AA|C|1575
4V4P|1|AA|U|1576
4V4P|1|AA|C|1577
4V4P|1|AA|U|1578
4V4P|1|AA|A|1579
4V4P|1|AA|A|1580
4V4P|1|AA|G|1581
4V4P|1|AA|C|1582
4V4P|1|AA|A|1583
4V4P|1|AA|C|1585
4V4P|1|AA|A|1586
4V4P|1|AA|A|1587

Current chains

Chain AA

23S ribosomal RNA

Nearby chains