IL_4V4P_127

3D structure

PDB id

4V4P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of 70S ribosome with thrS operator and tRNAs.

Experimental method

X-RAY DIFFRACTION

Resolution

5.5 Å

Loop

Sequence

GUUGCCAGC*GGGCACUC

Length

17 nucleotides

Bulged bases

4V4P|1|BA|U|1125

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4P|1|BA|G|1124
4V4P|1|BA|U|1125
4V4P|1|BA|U|1126
4V4P|1|BA|G|1127
4V4P|1|BA|C|1128
4V4P|1|BA|C|1129
4V4P|1|BA|A|1130
4V4P|1|BA|G|1131
4V4P|1|BA|C|1132
*
4V4P|1|BA|G|1142
4V4P|1|BA|G|1143
4V4P|1|BA|G|1144
4V4P|1|BA|C|1145
4V4P|1|BA|A|1146
4V4P|1|BA|C|1147
4V4P|1|BA|U|1148
4V4P|1|BA|C|1149

Current chains

Chain BA

16S rRNA

Nearby chains

Chain BL

30S ribosomal protein S9

Chain BM

30S ribosomal protein S10