IL_4V4P_148
3D structure
- PDB id
- 4V4P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of 70S ribosome with thrS operator and tRNAs.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5.5 Å
Loop
- Sequence
- UAAGUGGUAAAGGAUG*CGCCGAAAAUGAUGCGGGGCUUAA
- Length
- 40 nucleotides
- Bulged bases
- 4V4P|1|AA|G|1025, 4V4P|1|AA|U|1033, 4V4P|1|AA|A|1127, 4V4P|1|AA|A|1128, 4V4P|1|AA|A|1129, 4V4P|1|AA|U|1130, 4V4P|1|AA|G|1131, 4V4P|1|AA|A|1132, 4V4P|1|AA|U|1133, 4V4P|1|AA|U|1141, 4V4P|1|AA|U|1142
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V4P|1|AA|U|1019
4V4P|1|AA|A|1020
4V4P|1|AA|A|1021
4V4P|1|AA|G|1022
4V4P|1|AA|U|1023
4V4P|1|AA|G|1024
4V4P|1|AA|G|1025
4V4P|1|AA|U|1026
4V4P|1|AA|A|1027
4V4P|1|AA|A|1028
4V4P|1|AA|A|1029
4V4P|1|AA|G|1030
4V4P|1|AA|G|1031
4V4P|1|AA|A|1032
4V4P|1|AA|U|1033
4V4P|1|AA|G|1034
*
4V4P|1|AA|C|1121
4V4P|1|AA|G|1122
4V4P|1|AA|C|1123
4V4P|1|AA|C|1124
4V4P|1|AA|G|1125
4V4P|1|AA|A|1126
4V4P|1|AA|A|1127
4V4P|1|AA|A|1128
4V4P|1|AA|A|1129
4V4P|1|AA|U|1130
4V4P|1|AA|G|1131
4V4P|1|AA|A|1132
4V4P|1|AA|U|1133
4V4P|1|AA|G|1134
4V4P|1|AA|C|1135
4V4P|1|AA|G|1136
4V4P|1|AA|G|1137
4V4P|1|AA|G|1138
4V4P|1|AA|G|1139
4V4P|1|AA|C|1140
4V4P|1|AA|U|1141
4V4P|1|AA|U|1142
4V4P|1|AA|A|142|||A
4V4P|1|AA|A|1143
Current chains
- Chain AA
- 23S ribosomal RNA
Nearby chains
- Chain A9
- 50S ribosomal protein L36
- Chain AB
- 5S ribosomal RNA; 5S rRNA
- Chain AE
- 50S ribosomal protein L3
- Chain AH
- 50S ribosomal protein L6
- Chain AM
- 50S ribosomal protein L13
- Chain AP
- 50S ribosomal protein L16
Coloring options: