IL_4V4Q_104
3D structure
- PDB id
- 4V4Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.46 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 4V4Q|1|BB|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4Q_104 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0884
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
4V4Q|1|BB|C|998
4V4Q|1|BB|U|999
4V4Q|1|BB|A|1000
4V4Q|1|BB|A|1001
4V4Q|1|BB|G|1002
*
4V4Q|1|BB|C|1153
4V4Q|1|BB|G|1154
4V4Q|1|BB|A|1155
4V4Q|1|BB|A|1156
4V4Q|1|BB|G|1157
Current chains
- Chain BB
- 23S ribosomal RNA
Nearby chains
- Chain BA
- 5S ribosomal RNA; 5S rRNA
- Chain BQ
- 50S ribosomal protein L20
- Chain BR
- 50S ribosomal protein L21
- Chain BY
- 50S ribosomal protein L30
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