IL_4V4Q_216

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GGGAG*UC

Length

7 nucleotides

Bulged bases (A, C, G, U)

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_21744.1

Basepair signature

cWW-L-L-L-cWW

Number of instances in this motif group

7

Unit IDs

4V4Q|1|CA|G|774
4V4Q|1|CA|G|775
4V4Q|1|CA|G|776
4V4Q|1|CA|A|777
4V4Q|1|CA|G|778
*
4V4Q|1|CA|U|804
4V4Q|1|CA|C|805

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CK

30S ribosomal protein S11

Chain DB

Large subunit ribosomal RNA; LSU rRNA

Chain DC

50S ribosomal protein L2