IL_4V4Q_234

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GAAG*CGGACC

Length

10 nucleotides

Bulged bases

4V4Q|1|CA|A|1257, 4V4Q|1|CA|A|1280, 4V4Q|1|CA|C|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_39249.1

Basepair signature

cWW-cSS-L-R-R-cWW

Number of instances in this motif group

4

Unit IDs

4V4Q|1|CA|G|1255
4V4Q|1|CA|A|1256
4V4Q|1|CA|A|1257
4V4Q|1|CA|G|1258
*
4V4Q|1|CA|C|1277
4V4Q|1|CA|G|1278
4V4Q|1|CA|G|1279
4V4Q|1|CA|A|1280
4V4Q|1|CA|C|1281
4V4Q|1|CA|C|1282

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CC

30S ribosomal protein S3

Chain CJ

30S ribosomal protein S10

Chain CN

30S ribosomal protein S14