IL_4V4Q_242

3D structure

PDB id

4V4Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3.46 Å

Loop

Sequence

GGAG*UGAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75779.1

Basepair signature

cWW-tSH-tHS-cWW

Number of instances in this motif group

55

Unit IDs

4V4Q|1|CA|G|1416
4V4Q|1|CA|G|1417
4V4Q|1|CA|A|1418
4V4Q|1|CA|G|1419
*
4V4Q|1|CA|U|1481
4V4Q|1|CA|G|1482
4V4Q|1|CA|A|1483
4V4Q|1|CA|C|1484

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CL

30S ribosomal protein S12

Chain DB

Large subunit ribosomal RNA; LSU rRNA