IL_4V4S_119
3D structure
- PDB id
- 4V4S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the whole ribosomal complex.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6.76 Å
Loop
- Sequence
- CGAGG*CCGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4S_119 not in the Motif Atlas
- Geometric match to IL_5J7L_274
- Geometric discrepancy: 0.3812
- The information below is about IL_5J7L_274
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_17948.2
- Basepair signature
- cWW-L-R-tSH-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
4V4S|1|BA|C|2350
4V4S|1|BA|G|2351
4V4S|1|BA|A|2352
4V4S|1|BA|G|2353
4V4S|1|BA|G|2354
*
4V4S|1|BA|C|2363
4V4S|1|BA|C|2364
4V4S|1|BA|G|2365
4V4S|1|BA|A|2366
4V4S|1|BA|G|2367
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B0
- 50S ribosomal protein L27
- Chain B8
- 50S ribosomal protein L35
- Chain BS
- 50S ribosomal protein L18
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