IL_4V4S_120
3D structure
- PDB id
- 4V4S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the whole ribosomal complex.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 6.76 Å
Loop
- Sequence
- GUCCC*GGGC
- Length
- 9 nucleotides
- Bulged bases
- 4V4S|1|BA|C|2402
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4S_120 not in the Motif Atlas
- Geometric match to IL_4V88_429
- Geometric discrepancy: 0.3758
- The information below is about IL_4V88_429
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_30621.4
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 66
Unit IDs
4V4S|1|BA|G|2400
4V4S|1|BA|U|2401
4V4S|1|BA|C|2402
4V4S|1|BA|C|2403
4V4S|1|BA|C|2404
*
4V4S|1|BA|G|2413
4V4S|1|BA|G|2414
4V4S|1|BA|G|2415
4V4S|1|BA|C|2416
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain B4
- 50S ribosomal protein L31
- Chain B6
- 50S ribosomal protein L33
- Chain B8
- 50S ribosomal protein L35
- Chain BP
- 50S ribosomal protein L15
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