IL_4V4S_153

3D structure

PDB id

4V4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

6.76 Å

Loop

Sequence

GCCGCGAAGACAG*UCGAGUGGC

Length

22 nucleotides

Bulged bases

4V4S|1|BA|C|1043, 4V4S|1|BA|A|1045, 4V4S|1|BA|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4S|1|BA|G|1039
4V4S|1|BA|C|1040
4V4S|1|BA|C|1041
4V4S|1|BA|G|1042
4V4S|1|BA|C|1043
4V4S|1|BA|G|1044
4V4S|1|BA|A|1045
4V4S|1|BA|A|1046
4V4S|1|BA|G|1047
4V4S|1|BA|A|1048
4V4S|1|BA|C|1049
4V4S|1|BA|A|1050
4V4S|1|BA|G|1051
*
4V4S|1|BA|U|1108
4V4S|1|BA|C|1109
4V4S|1|BA|G|1110
4V4S|1|BA|A|1111
4V4S|1|BA|G|1112
4V4S|1|BA|U|1113
4V4S|1|BA|G|1114
4V4S|1|BA|G|1115
4V4S|1|BA|C|1116

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B9

50S ribosomal protein L36

Chain BH

50S ribosomal protein L6

Chain BZ

50S ribosomal protein CTC