IL_4V4S_156

3D structure

PDB id

4V4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

6.76 Å

Loop

Sequence

GUGCGAUGGGGGGACG*CCAAGAAAAGCCUCUAAGCACAAC

Length

40 nucleotides

Bulged bases

4V4S|1|BA|A|1566, 4V4S|1|BA|C|1585, 4V4S|1|BA|A|1586

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4S|1|BA|G|1414
4V4S|1|BA|U|1415
4V4S|1|BA|G|1416
4V4S|1|BA|C|1417
4V4S|1|BA|G|1418
4V4S|1|BA|A|1419
4V4S|1|BA|U|1420
4V4S|1|BA|G|1421
4V4S|1|BA|G|1422
4V4S|1|BA|G|1423
4V4S|1|BA|G|1424
4V4S|1|BA|G|1425
4V4S|1|BA|G|1426
4V4S|1|BA|A|1427
4V4S|1|BA|C|1428
4V4S|1|BA|G|1429
*
4V4S|1|BA|C|1564
4V4S|1|BA|C|1565
4V4S|1|BA|A|1566
4V4S|1|BA|A|1567
4V4S|1|BA|G|1568
4V4S|1|BA|A|1569
4V4S|1|BA|A|1570
4V4S|1|BA|A|1571
4V4S|1|BA|A|1572
4V4S|1|BA|G|1573
4V4S|1|BA|C|1574
4V4S|1|BA|C|1575
4V4S|1|BA|U|1576
4V4S|1|BA|C|1577
4V4S|1|BA|U|1578
4V4S|1|BA|A|1579
4V4S|1|BA|A|1580
4V4S|1|BA|G|1581
4V4S|1|BA|C|1582
4V4S|1|BA|A|1583
4V4S|1|BA|C|1585
4V4S|1|BA|A|1586
4V4S|1|BA|A|1587
4V4S|1|BA|C|1588

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S ribosomal protein L2