IL_4V4S_164

3D structure

PDB id

4V4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

6.76 Å

Loop

Sequence

CUCG*CACGCGAG

Length

12 nucleotides

Bulged bases

4V4S|1|BA|A|2572, 4V4S|1|BA|C|2573, 4V4S|1|BA|G|2576, 4V4S|1|BA|A|2577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4S|1|BA|C|2510
4V4S|1|BA|U|2511
4V4S|1|BA|C|2512
4V4S|1|BA|G|2513
*
4V4S|1|BA|C|2571
4V4S|1|BA|A|2572
4V4S|1|BA|C|2573
4V4S|1|BA|G|2574
4V4S|1|BA|C|2575
4V4S|1|BA|G|2576
4V4S|1|BA|A|2577
4V4S|1|BA|G|2578

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain AY

Peptide chain release factor 2

Chain B5

50S ribosomal protein L32

Chain BE

50S ribosomal protein L3