IL_4V4S_174

3D structure

PDB id

4V4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the whole ribosomal complex.

Experimental method

X-RAY DIFFRACTION

Resolution

6.76 Å

Loop

Sequence

CCGAUGCC*GGUAAGG

Length

15 nucleotides

Bulged bases

4V4S|1|BA|A|1204, 4V4S|1|BA|U|1205

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4S|1|BA|C|1201
4V4S|1|BA|C|1202
4V4S|1|BA|G|1203
4V4S|1|BA|A|1204
4V4S|1|BA|U|1205
4V4S|1|BA|G|1206
4V4S|1|BA|C|1207
4V4S|1|BA|C|1208
*
4V4S|1|BA|G|1238
4V4S|1|BA|G|1239
4V4S|1|BA|U|1240
4V4S|1|BA|A|1241
4V4S|1|BA|A|1242
4V4S|1|BA|G|1243
4V4S|1|BA|G|1244

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BF

50S ribosomal protein L4