IL_4V4V_063

3D structure

PDB id

4V4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UGUGUGUGU*AUGCACAUG

Length

18 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4V|1|B0|U|284
4V4V|1|B0|G|285
4V4V|1|B0|U|286
4V4V|1|B0|G|287
4V4V|1|B0|U|288
4V4V|1|B0|G|289
4V4V|1|B0|U|290
4V4V|1|B0|G|291
4V4V|1|B0|U|292
*
4V4V|1|B0|A|348
4V4V|1|B0|U|349
4V4V|1|B0|G|350
4V4V|1|B0|C|351
4V4V|1|B0|A|352
4V4V|1|B0|C|353
4V4V|1|B0|A|354
4V4V|1|B0|U|355
4V4V|1|B0|G|356

Current chains

Chain B0

23S ribosomal RNA

Nearby chains