IL_4V4V_073
3D structure
- PDB id
- 4V4V (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 15 Å
Loop
- Sequence
- UUU*AUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4V_073 not in the Motif Atlas
- Homologous match to IL_7A0S_030
- Geometric discrepancy: 0.3135
- The information below is about IL_7A0S_030
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_42997.3
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 20
Unit IDs
4V4V|1|B0|U|870
4V4V|1|B0|U|871
4V4V|1|B0|U|872
*
4V4V|1|B0|A|905
4V4V|1|B0|U|906
4V4V|1|B0|G|907
Current chains
- Chain B0
- 23S ribosomal RNA
Nearby chains
- Chain BK
- 50S ribosomal protein L16
Coloring options: