IL_4V4V_081

3D structure

PDB id

4V4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

CCCAGACAG*UCGAG

Length

14 nucleotides

Bulged bases

4V4V|1|B0|A|1046

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4V|1|B0|C|1043
4V4V|1|B0|C|1044
4V4V|1|B0|C|1045
4V4V|1|B0|A|1046
4V4V|1|B0|G|1047
4V4V|1|B0|A|1048
4V4V|1|B0|C|1049
4V4V|1|B0|A|1050
4V4V|1|B0|G|1051
*
4V4V|1|B0|U|1108
4V4V|1|B0|C|1109
4V4V|1|B0|G|1110
4V4V|1|B0|A|1111
4V4V|1|B0|G|1112

Current chains

Chain B0

23S ribosomal RNA

Nearby chains

Chain B3

50S ribosomal protein L7/L12

Chain B5

50S ribosomal protein L7/L12