IL_4V4V_121

3D structure

PDB id

4V4V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GUGUUC*GGUAGC

Length

12 nucleotides

Bulged bases

4V4V|1|B0|U|2689

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4V|1|B0|G|2686
4V4V|1|B0|U|2687
4V4V|1|B0|G|2688
4V4V|1|B0|U|2689
4V4V|1|B0|U|2690
4V4V|1|B0|C|2691
*
4V4V|1|B0|G|2718
4V4V|1|B0|G|2719
4V4V|1|B0|U|2720
4V4V|1|B0|A|2721
4V4V|1|B0|G|2722
4V4V|1|B0|C|2723

Current chains

Chain B0

23S ribosomal RNA

Nearby chains

Chain BB

50S ribosomal protein L3

Chain BI

50S ribosomal protein L14

Chain BL

50S ribosomal protein L17

Chain BN

50S ribosomal protein L19