IL_4V4W_056

3D structure

PDB id

4V4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GCCUAAUC*GUAGC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4W|1|B0|G|273
4V4W|1|B0|C|274
4V4W|1|B0|C|275
4V4W|1|B0|U|276
4V4W|1|B0|A|278
4V4W|1|B0|A|279
4V4W|1|B0|U|280
4V4W|1|B0|C|281
*
4V4W|1|B0|G|359
4V4W|1|B0|U|360
4V4W|1|B0|A|362
4V4W|1|B0|G|363
4V4W|1|B0|C|364

Current chains

Chain B0

23S ribosomal RNA

Nearby chains