IL_4V4W_152

3D structure

PDB id

4V4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

UCCUAGUAC*GGACCGGA

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4W|1|B0|U|2650
4V4W|1|B0|C|2651
4V4W|1|B0|C|2652
4V4W|1|B0|U|2653
4V4W|1|B0|A|2654
4V4W|1|B0|G|2655
4V4W|1|B0|U|2656
4V4W|1|B0|A|2657
4V4W|1|B0|C|2658
*
4V4W|1|B0|G|2663
4V4W|1|B0|G|2664
4V4W|1|B0|A|2665
4V4W|1|B0|C|2666
4V4W|1|B0|C|2667
4V4W|1|B0|G|2668
4V4W|1|B0|G|2669
4V4W|1|B0|A|2670

Current chains

Chain B0

23S ribosomal RNA

Nearby chains

Chain BE

50S ribosomal protein L6

Chain BI

50S ribosomal protein L14