IL_4V4W_159

3D structure

PDB id

4V4W (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143

Experimental method

ELECTRON MICROSCOPY

Resolution

15 Å

Loop

Sequence

GUGUGUGU*AAUGCACAU

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V4W|1|B0|G|285
4V4W|1|B0|U|286
4V4W|1|B0|G|287
4V4W|1|B0|U|288
4V4W|1|B0|G|289
4V4W|1|B0|U|290
4V4W|1|B0|G|291
4V4W|1|B0|U|292
*
4V4W|1|B0|A|347
4V4W|1|B0|A|348
4V4W|1|B0|U|349
4V4W|1|B0|G|350
4V4W|1|B0|C|351
4V4W|1|B0|A|352
4V4W|1|B0|C|353
4V4W|1|B0|A|354
4V4W|1|B0|U|355

Current chains

Chain B0

23S ribosomal RNA

Nearby chains