IL_4V4X_046
3D structure
- PDB id
- 4V4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5 Å
Loop
- Sequence
- GAUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 4V4X|1|AA|U|1257, 4V4X|1|AA|A|1280, 4V4X|1|AA|U|1281
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4X_046 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.3232
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_11344.2
- Basepair signature
- cWW-cSS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V4X|1|AA|G|1255
4V4X|1|AA|A|1256
4V4X|1|AA|U|1257
4V4X|1|AA|G|1258
*
4V4X|1|AA|C|1277
4V4X|1|AA|U|1278
4V4X|1|AA|A|1279
4V4X|1|AA|A|1280
4V4X|1|AA|U|1281
4V4X|1|AA|C|1282
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AF
- 30S ribosomal protein S3
- Chain AM
- 30S ribosomal protein S10
- Chain AQ
- 30S ribosomal protein S14
Coloring options: