IL_4V4X_157
3D structure
- PDB id
- 4V4X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 5 Å
Loop
- Sequence
- UUUCC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 4V4X|1|BA|U|2689, 4V4X|1|BA|C|2690
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4X_157 not in the Motif Atlas
- Homologous match to IL_9DFE_104
- Geometric discrepancy: 0.2867
- The information below is about IL_9DFE_104
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
4V4X|1|BA|U|2687
4V4X|1|BA|U|2688
4V4X|1|BA|U|2689
4V4X|1|BA|C|2690
4V4X|1|BA|C|2691
*
4V4X|1|BA|G|2718
4V4X|1|BA|G|2719
4V4X|1|BA|U|2720
4V4X|1|BA|A|2721
4V4X|1|BA|G|2722
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BE
- 50S ribosomal protein L3
- Chain BN
- 50S ribosomal protein L14
- Chain BQ
- 50S ribosomal protein L17
- Chain BS
- 50S ribosomal protein L19
Coloring options: