IL_4V4Z_064

3D structure

PDB id

4V4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.

Experimental method

X-RAY DIFFRACTION

Resolution

4.51 Å

Loop

Sequence

GCGUG*CC

Length

7 nucleotides

Bulged bases

4V4Z|1|BA|U|271|||C

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4Z_064 not in the Motif Atlas

Geometric match to IL_1R3E_002

Geometric discrepancy: 0.1971

The information below is about IL_1R3E_002

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_84476.1

Basepair signature

cWW-cWW

Number of instances in this motif group

13

Unit IDs

4V4Z|1|BA|G|271
4V4Z|1|BA|C|271|||A
4V4Z|1|BA|G|271|||B
4V4Z|1|BA|U|271|||C
4V4Z|1|BA|G|272
*
4V4Z|1|BA|C|365
4V4Z|1|BA|C|366

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BK

50S RIBOSOMAL PROTEIN L9