IL_4V4Z_137
3D structure
- PDB id
- 4V4Z (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 4.51 Å
Loop
- Sequence
- CCUCU*AUG
- Length
- 8 nucleotides
- Bulged bases
- 4V4Z|1|BA|U|2726
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V4Z_137 not in the Motif Atlas
- Homologous match to IL_4WF9_101
- Geometric discrepancy: 0.3252
- The information below is about IL_4WF9_101
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
4V4Z|1|BA|C|2680
4V4Z|1|BA|C|2681
4V4Z|1|BA|U|2682
4V4Z|1|BA|C|2683
4V4Z|1|BA|U|2684
*
4V4Z|1|BA|A|2725
4V4Z|1|BA|U|2726
4V4Z|1|BA|G|2727
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BE
- 50S RIBOSOMAL PROTEIN L3
- Chain BN
- 50S RIBOSOMAL PROTEIN L14
- Chain BQ
- 50S RIBOSOMAL PROTEIN L17
- Chain BS
- 50S RIBOSOMAL PROTEIN L19
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