IL_4V4Z_151

3D structure

PDB id

4V4Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.

Experimental method

X-RAY DIFFRACTION

Resolution

4.51 Å

Loop

Sequence

GAC*GUAC

Length

7 nucleotides

Bulged bases

4V4Z|1|AA|A|1394

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V4Z_151 not in the Motif Atlas

Geometric match to IL_8VTW_096

Geometric discrepancy: 0.341

The information below is about IL_8VTW_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54650.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

16

Unit IDs

4V4Z|1|AA|G|922
4V4Z|1|AA|A|923
4V4Z|1|AA|C|924
*
4V4Z|1|AA|G|1392
4V4Z|1|AA|U|1393
4V4Z|1|AA|A|1394
4V4Z|1|AA|C|1395

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AH

30S ribosomal protein S5