IL_4V5A_057

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGAGCG*CGUGAC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|AA|G|1416
4V5A|1|AA|G|1417
4V5A|1|AA|A|1418
4V5A|1|AA|G|1419
4V5A|1|AA|C|1420
4V5A|1|AA|G|1421
*
4V5A|1|AA|C|1479
4V5A|1|AA|G|1480
4V5A|1|AA|U|1481
4V5A|1|AA|G|1482
4V5A|1|AA|A|1483
4V5A|1|AA|C|1484

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S RIBOSOMAL PROTEIN S12

Chain AY

RIBOSOME RECYCLING FACTOR

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BO

50S RIBOSOMAL PROTEIN L14