IL_4V5A_177

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGGACG*CGGUACC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|CA|G|445
4V5A|1|CA|G|446
4V5A|1|CA|G|447
4V5A|1|CA|A|448
4V5A|1|CA|C|449
4V5A|1|CA|G|450
*
4V5A|1|CA|C|483
4V5A|1|CA|G|484
4V5A|1|CA|G|485
4V5A|1|CA|U|486
4V5A|1|CA|A|487
4V5A|1|CA|C|488
4V5A|1|CA|C|489

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CD

30S RIBOSOMAL PROTEIN S4

Chain CP

30S RIBOSOMAL PROTEIN S16