IL_4V5A_230

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGAAUCCCCAG*UGGGGGGAUAG

Length

22 nucleotides

Bulged bases

4V5A|1|DA|A|283, 4V5A|1|DA|G|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|DA|C|280
4V5A|1|DA|G|281
4V5A|1|DA|A|282
4V5A|1|DA|A|283
4V5A|1|DA|U|284
4V5A|1|DA|C|285
4V5A|1|DA|C|286
4V5A|1|DA|C|287
4V5A|1|DA|C|288
4V5A|1|DA|A|289
4V5A|1|DA|G|290
*
4V5A|1|DA|U|350
4V5A|1|DA|G|351
4V5A|1|DA|G|352
4V5A|1|DA|G|353
4V5A|1|DA|G|354
4V5A|1|DA|G|355
4V5A|1|DA|G|356
4V5A|1|DA|A|357
4V5A|1|DA|U|358
4V5A|1|DA|A|359
4V5A|1|DA|G|360

Current chains

Chain DA

23S ribosomal RNA

Nearby chains