IL_4V5A_235

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GAAACC*GGAGAUAGC

Length

15 nucleotides

Bulged bases

4V5A|1|DA|G|801, 4V5A|1|DA|G|805

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|DA|G|674
4V5A|1|DA|A|675
4V5A|1|DA|A|676
4V5A|1|DA|A|677
4V5A|1|DA|C|678
4V5A|1|DA|C|679
*
4V5A|1|DA|G|798
4V5A|1|DA|G|799
4V5A|1|DA|A|800
4V5A|1|DA|G|801
4V5A|1|DA|A|802
4V5A|1|DA|U|803
4V5A|1|DA|A|804
4V5A|1|DA|G|805
4V5A|1|DA|C|806

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D7

50S RIBOSOMAL PROTEIN L34

Chain DF

50S RIBOSOMAL PROTEIN L4

Chain DP

50S RIBOSOMAL PROTEIN L15