IL_4V5A_323

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CAUCAGC*GCGACGACG

Length

16 nucleotides

Bulged bases

4V5A|1|AA|U|244, 4V5A|1|AA|C|280

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|AA|C|242
4V5A|1|AA|A|243
4V5A|1|AA|U|244
4V5A|1|AA|C|245
4V5A|1|AA|A|246
4V5A|1|AA|G|247
4V5A|1|AA|C|248
*
4V5A|1|AA|G|276
4V5A|1|AA|C|277
4V5A|1|AA|G|278
4V5A|1|AA|A|279
4V5A|1|AA|C|280
4V5A|1|AA|G|281
4V5A|1|AA|A|282
4V5A|1|AA|C|283
4V5A|1|AA|G|284

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AL

30S RIBOSOMAL PROTEIN S12

Chain AQ

30S RIBOSOMAL PROTEIN S17