IL_4V5A_326

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CGUGCCAG*CGGUAAUACG

Length

18 nucleotides

Bulged bases

4V5A|1|AA|A|532, 4V5A|1|AA|U|534, 4V5A|1|AA|A|535

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|AA|C|514
4V5A|1|AA|G|515
4V5A|1|AA|U|516
4V5A|1|AA|G|517
4V5A|1|AA|C|518
4V5A|1|AA|C|519
4V5A|1|AA|A|520
4V5A|1|AA|G|521
*
4V5A|1|AA|C|528
4V5A|1|AA|G|529
4V5A|1|AA|G|530
4V5A|1|AA|U|531
4V5A|1|AA|A|532
4V5A|1|AA|A|533
4V5A|1|AA|U|534
4V5A|1|AA|A|535
4V5A|1|AA|C|536
4V5A|1|AA|G|537

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AC

30S RIBOSOMAL PROTEIN S3

Chain AD

30S RIBOSOMAL PROTEIN S4

Chain AL

30S RIBOSOMAL PROTEIN S12

Chain AX

MRNA