IL_4V5A_346

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

GGAGGU*GCCUCCC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|BA|G|1484
4V5A|1|BA|G|1485
4V5A|1|BA|A|1486
4V5A|1|BA|G|1487
4V5A|1|BA|G|1488
4V5A|1|BA|U|1489
*
4V5A|1|BA|G|1500
4V5A|1|BA|C|1501
4V5A|1|BA|C|1502
4V5A|1|BA|U|1503
4V5A|1|BA|C|1504
4V5A|1|BA|C|1505
4V5A|1|BA|C|1506

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BD

50S RIBOSOMAL PROTEIN L2