IL_4V5A_356

3D structure

PDB id

4V5A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

UGGGC*GCCUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5A|1|BB|U|80
4V5A|1|BB|G|81
4V5A|1|BB|G|82
4V5A|1|BB|G|83
4V5A|1|BB|C|84
*
4V5A|1|BB|G|93
4V5A|1|BB|C|94
4V5A|1|BB|C|95
4V5A|1|BB|U|96
4V5A|1|BB|G|97

Current chains

Chain BB

5S ribosomal RNA

Nearby chains

Chain B3

50S RIBOSOMAL PROTEIN L30

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BQ

50S RIBOSOMAL PROTEIN L16

Chain BZ

50S RIBOSOMAL PROTEIN L25