IL_4V5A_373
3D structure
- PDB id
- 4V5A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMet
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.5 Å
Loop
- Sequence
- GUCAC*GAAGUC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5A_373 not in the Motif Atlas
- Homologous match to IL_4LFB_058
- Geometric discrepancy: 0.2393
- The information below is about IL_4LFB_058
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5A|1|CA|G|1405
4V5A|1|CA|U|1406
4V5A|1|CA|C|1407
4V5A|1|CA|A|1408
4V5A|1|CA|C|1409
*
4V5A|1|CA|G|1491
4V5A|1|CA|A|1492
4V5A|1|CA|A|1493
4V5A|1|CA|G|1494
4V5A|1|CA|U|1495
4V5A|1|CA|C|1496
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CL
- 30S RIBOSOMAL PROTEIN S12
- Chain CM
- 30S RIBOSOMAL PROTEIN S13
- Chain CX
- MRNA
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: