IL_4V5B_003
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- CCUG*CAGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5B_003 not in the Motif Atlas
- Homologous match to IL_7A0S_104
- Geometric discrepancy: 0.5504
- The information below is about IL_7A0S_104
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_05192.5
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
4V5B|1|AA|C|30
4V5B|1|AA|C|31
4V5B|1|AA|U|32
4V5B|1|AA|G|33
*
4V5B|1|AA|C|49
4V5B|1|AA|A|50
4V5B|1|AA|G|51
4V5B|1|AA|A|52
4V5B|1|AA|A|53
4V5B|1|AA|G|54
Current chains
- Chain AA
- 5S RIBOSOMAL RNA
Nearby chains
- Chain AF
- 50S RIBOSOMAL PROTEIN L5
- Chain AO
- 50S RIBOSOMAL PROTEIN L18
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