3D structure

PDB id
4V5B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of PDF binding helix in complex with the ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
CCUU*AAUG
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V5B|1|AB|C|2103
4V5B|1|AB|C|2104
4V5B|1|AB|U|2105
4V5B|1|AB|U|2106
*
4V5B|1|AB|A|2183
4V5B|1|AB|A|2184
4V5B|1|AB|U|2185
4V5B|1|AB|G|2186

Current chains

Chain AB
23S RIBOSOMAL RNA

Nearby chains

No other chains within 10Å

Coloring options:

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