IL_4V5B_088
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- CA*UACG
- Length
- 6 nucleotides
- Bulged bases
- 4V5B|1|AB|A|2572, 4V5B|1|AB|C|2573
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5B_088 not in the Motif Atlas
- Homologous match to IL_5J7L_341
- Geometric discrepancy: 0.2189
- The information below is about IL_5J7L_341
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_42626.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 14
Unit IDs
4V5B|1|AB|C|2512
4V5B|1|AB|A|2513
*
4V5B|1|AB|U|2571
4V5B|1|AB|A|2572
4V5B|1|AB|C|2573
4V5B|1|AB|G|2574
Current chains
- Chain AB
- 23S RIBOSOMAL RNA
Nearby chains
- Chain AD
- 50S RIBOSOMAL PROTEIN L3
Coloring options: