3D structure

PDB id
4V5B (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of PDF binding helix in complex with the ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
GAUAAGUG*CACGAAAC
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V5B|1|AB|G|2737
4V5B|1|AB|A|2738
4V5B|1|AB|U|2739
4V5B|1|AB|A|2740
4V5B|1|AB|A|2741
4V5B|1|AB|G|2742
4V5B|1|AB|U|2743
4V5B|1|AB|G|2744
*
4V5B|1|AB|C|2760
4V5B|1|AB|A|2761
4V5B|1|AB|C|2762
4V5B|1|AB|G|2763
4V5B|1|AB|A|2764
4V5B|1|AB|A|2765
4V5B|1|AB|A|2766
4V5B|1|AB|C|2767

Current chains

Chain AB
23S RIBOSOMAL RNA

Nearby chains

Chain A4
50S RIBOSOMAL PROTEIN L36
Chain AG
50S RIBOSOMAL PROTEIN L6
Chain AJ
50S RIBOSOMAL PROTEIN L13

Coloring options:

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