IL_4V5B_107
3D structure
- PDB id
- 4V5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of PDF binding helix in complex with the ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.74 Å
Loop
- Sequence
- GUAAC*GAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5B_107 not in the Motif Atlas
- Geometric match to IL_2OEU_001
- Geometric discrepancy: 0.3546
- The information below is about IL_2OEU_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_46387.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
4V5B|1|BA|G|69
4V5B|1|BA|U|70
4V5B|1|BA|A|71
4V5B|1|BA|A|72
4V5B|1|BA|C|73
*
4V5B|1|BA|G|97
4V5B|1|BA|A|98
4V5B|1|BA|C|99
Current chains
- Chain BA
- 16S RIBOSOMAL RNA
Nearby chains
No other chains within 10ÅColoring options: